实验动物与比较医学 ›› 2017, Vol. 37 ›› Issue (5): 372-377.DOI: 10.3969/j.issn.1674-5817.2017.05.006

• 论著 • 上一篇    下一篇

大鼠微小病毒和细小病毒双重荧光定量PCR检测方法建立

孙竹筠1, 蔡骁垚1,2, 熊炜4, 陈懿斐3, 张泉2, 李泽君1, 魏晓锋3, 陈鸿军1   

  1. 1.中国农业科学院上海兽医研究所, 上海 200241;
    2.扬州大学兽医学院, 扬州 225009;
    3.上海实验动物研究中心, 上海 201203;
    4.上海出入境检验检疫局, 上海 200135
  • 收稿日期:2017-03-06 出版日期:2017-10-25 发布日期:2017-10-25
  • 作者简介:孙竹筠(1981-),女,硕士,主要从事动物生态毒理研究。E-mail:sunzhuyun@shvri.ac.cn;共同第一作者:蔡骁垚(1990-),男,硕士研究生,主要从事动物病毒学研究。E-mail:1007567118@qq.com
  • 基金资助:
    上海市科委实验动物专项资金资助(15140900600)

Establishment of TaqMan Real-time Fluorescent Quantitative PCR for Detecting Rat Minute Virus and Rat Parvovirus

SUN Zhu-yun1, CAI Xiao-yao1,2, XIONG Wei4, CHEN Yi-fei3, ZHANG Quan2, LI Ze-jun1, WEI Xiao-feng3, CHEN Hong-jun1   

  1. 1. Shanghai Veterinary Research Institute, CAAS, Shanghai 200241, China;
    2. Veterinary Medicine College, Yangzhou University, Yangzhou Jiangsu 225009, China;
    3. Shanghai Lab. Animal Research Center, Shanghai 201203, China;
    4 Shanghai Entry-Exit Inspection and Quarantine Bureau, Shanghai 200135, China
  • Received:2017-03-06 Online:2017-10-25 Published:2017-10-25

摘要: 目的 建立快速、准确地同时检测和鉴别大鼠细小病毒(RPV)和大鼠微小病毒(RMV)的双重TaqMan实时荧光定量PCR方法。方法 根据 GenBank中已公布的RMV NTU1株全基因组序列(JX627317.1),在1 705~1 808 nt处设计引物和TaqMan探针,根据RPV NTU1毒株的全基因组序列(JX827169),在863-967nt处设计引物和TaqMan探针。以构建的质粒参考物为模板建立荧光定量PCR检测方法,并对该鉴别检测方法的灵敏度、稳定性和特异性进行评价; 用建立的荧光定量方法对50份临床样品进行检测,并用酶联免疫吸附试验(ELISA)的商品试剂盒进行验证。结果 建立的RMV和RPV的鉴别荧光定量PCR方法标准曲线的线性关系良好,R2值可达0.99,最低检测限均为10拷贝数/μL; 应用鉴别荧光定量PCR方法和ELISA检测试剂盒,对100份大鼠肝脏和50份血清样品病料进行检测,结果均为阴性。结论 建立的RMV和RPV的TaqMan实时荧光定量PCR方法具有特异、灵敏的特点,适用于RMV和RPV的临床监测。

关键词: 大鼠微小病毒(RMV), 大鼠细小病毒(RPV), TaqMan探针, 荧光定量PCR

Abstract: Objective To establish TaqMan real-time fluorescent quantitative PCR method which can detect rat minute virus (RMV) and rat parvovirus (RPV) quickly and accurately in clinic. Method According to the whole genome sequence of strain RMV NTU1 (Accession No. JX627317.1 in Genbank) the primers and TaqMan probe were designed from the 1705~1808 nt. And according to the whole genome sequence of strain RPV NTU1 (JX827169) the primers and TaqMan probe were designed from the 863-967nt. The stability, specificity, and sensitivity of the method were evaluated through real-time quantitative PCR method, which is based on the standardized plasmid constructed. 50 clinical samples were detected using this fluorescence quantitative method, which validated with the traditional ELISA method. Result The real-time quantitative PCR for detecting RMV and RPV showed a perfect linear relationship of standard curve, and R2 value reached 0. 99 with a high specificity. The sensitivity of the real-time PCR was 10 copies/μL at minimum. Due to dual specificity of primer and probe, TaqMan quantitative PCR is extremely accurate. One hundred liver samples and 50 serum samples were negative via ELISA and real time quantitative PCR respectively. Conclusion The TaqMan probe-based real-time PCR method is established with good specificity and sensitivity, which can make a powerful technical support for RMV and RPV investigation and detection.

Key words: Rat minute virus (RMV), Rat parvovirus (RPV), TaqMan probe, Real-time PCR

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