›› 2010, Vol. 30 ›› Issue (3): 183-187.

• 论文 • 上一篇    下一篇

泰泽病原体nested-PCR检测方法的优化及应用研究

  

  1. 1.上海实验动物研究中心;2.上海市实验动物质量监督检验站,上海 201203
  • 收稿日期:2009-09-25 出版日期:2010-03-31 发布日期:2010-03-31
  • 基金资助:
    上海市科技基金项目(08140901300)

Optimization for Nested-PCR Method for Bacillus piliformis Detection and Its Application

  1. 1.Shanghai Laboratory A nimal Research Centre;2.Shanghai Quality Monitoring Centre for Laboratory Animals,Shanghai 201203, China
  • Received:2009-09-25 Online:2010-03-31 Published:2010-03-31

摘要: 目的 对泰泽病原体nested-PCR检测方法进行优化和应用研究.方法以感染泰泽病原体RJ株的大鼠肝组织作为阳性对照,按国标GB/T 14926.10-2008间接免疫荧光检测(IFA)呈阳性的上海地区大鼠肝组织为材料,对本室已建立的泰泽病原体nested-PCR检测方法中的DNA抽提方法和PCR过程进行优化,并应用于22只免疫抑制实验动物的泰泽病原体检测.结果 肝脏组织DNA以酚/氯仿抽提法为好:nested-PCR出现196 bp的特异性条带,此方法的敏感性达1pg;产物纯化后进行测序比对分析显示,上海地区实验大鼠感染样品以及RJ株感染样品的序列均与Genbank中泰泽病原体16S rRNA(Genbank D14638.1)的同源性为100%.应用研究表明,22个样品中IFA检测阳性样品8个,阳性率为36.4%:Nested-PCR检测阳性样品13个,包含所有的IFA阳性样品,阳性率为59.1%.结论 本方法灵敏度高,特异性强,经进一步应用改进后,可用于泰泽病原体的检测.

关键词: 泰泽病原体, Nested-PCR, IFA

Abstract: Objective To optimize nested-PCR of Bacillus piliformis detection and to explore its application. Method The liver from rats infected by Bacillus piliformis RJ was used as the positive control. This sample was positive for Bacillus piliformis detected by indirect immunofluorescence(IFA) according to the GB/T 14926.10-2008《laboratory animal- Method for examination of Tyzzer's organism GB/T 14926.10-2008》. Nested-PCR of Bacillus piliformis established previously by our lab was optimized, including DNA extraction and PCR conditions. This optimized nested-PCR was applied to detect the Bacillus piliformis of 22 immunosuppressive rats. Results Phenol/chloroform DNA extraction method of liver was optimal; A specific 196 bp DNA fragment was obtained, the sensitivity of this method reached to 1 pg; Blast results showed that all the sequences of the specific DNA fragment shared 100% homology with the 16 S rRNA of Bacillus piliformis presented in Genbank (D14638.1).Twenty-two immunosuppressive rats were detected for Bacillus piliformis. The positive rate by IFA is 36.4%(8/22); The positive rate by nested-PCR is 59.1% (13/22indicating nested-PCR is more sensitive than IFA. Meanwhile all the positive samples detected by EFAwere also positive detected by nested PCR.Conclusion This optimized nested-PCR method has high sensitivity and specificity and can be applied to Bacillus piliformis detection.

Key words: Bacillus piliformis;Nested-PCR, IFA