›› 2009, Vol. 29 ›› Issue (4): 237-240.

所属专题: 实验动物资源开发与利用

• 论文 • 上一篇    下一篇

四种实验用小型猪mtDNA控制区5'端序列的比较研究

  

  1. 1.广州医学院第一附属医院,广州,510120;2.南方医科大学实验动物中心,广州,510515
  • 收稿日期:2009-06-15 出版日期:2009-04-30 发布日期:2009-04-30

Comparative Research on the Sequence of 5' End of MtDNA D-loop Region of Four Breeds of Mini-pigs

  1. 1. First Affiliated Hospital of Guangzhou Medical University; Guangzhou 510120, China;2. Laboratory Animal Centre, Southern Medical University, Guangzhou 510515, China
  • Received:2009-06-15 Online:2009-04-30 Published:2009-04-30

摘要: 目的 测定西藏小型猪以及巴马小型猪、贵州香猪和五指山猪的mtDNA控制区5'端序列,比较研究其遗传变异和与国内家猪的亲缘关系。方法 扩增四种小型猪的mtDNA控制区5'端,测序并进行所测序列多重比对,确定变异位点、单倍型,并建立亲缘关系树。结果 与荣昌猪相比,西藏小型猪mtDNA控制区5-端侧翼区704bp,有20个变异位点,由此归纳出26个单倍型;其中有两种主体单倍型,三个转换位点(305,500,691)的碱基分别为t,a,a和c,g,g.巴马小型猪、贵州香猪和五指山猪mtDiNA控制区5'端变异位点较少,分别只有4、4、3种单倍型。亲缘关系树的分析表明,西藏小型猪与其它三种小型猪有较近的亲缘关系。结论 西藏小型猪群体存在遗传分化,与巴马小型猪、贵州香猪和五指山猪亲缘关系较近;巴马小型猪、贵州香猪和五指山猪遗传均一性较高,可能与长期的人工选择有关。

关键词: 实验用小型猪, 线粒体D.NA, 控制区5'端, 比较研究

Abstract: Objectives To analyze the sequence of 5' end of mtDNA D-loop region of Tibet minipigs, Bama miniature pigs and Guizhou xiang pigs and WZS pigs,to investigate genetic differentiation and the phylogenetic relationship between mini-pigs and several other breeds of Chinese domesticated pigs. Methods The fragment of 5' end of D-loop region in four breed mini-pigs were amplified and sequenced, followed by being multiple alignment compared with each other,then variation sites and haplotype were made. Genetic relationship tree between mini-pigs and other China domestic pigs were established. Results Compared with Rongchang pig,704bp sequence at 5' end of the Tibet mini-pigs D-loop had 20 polymorphic sites which deduced 26 haplotypes. There were two mainly haplotypes which have three transform sites at 305,500 and 691,one is t,a,a,respectively; another is c, g, g , respectively. Bama miniature pigs, Guizhou xiang pigs and WZS pigs had 4,4 and 3 haplotypes, respectively. Tibet mini-pigs had close relation with domestic pigs in southwest China by using phylogenetic tree. Conclusions There were genetic differentiation in Tibet mini-pigs colony and had a closely genetic relationships with southwest Chinese domestic pigs. Bama miniature pig and Guizhou xiang pig and WZS pig had less genetic differentiation that may be the results of artificial selection.

Key words: Experimental mini-pig, mtDNA, 5' end of D-loop region, Comparative research