实验动物与比较医学 ›› 2019, Vol. 39 ›› Issue (2): 140-145.DOI: 10.3969/j.issn.1674-5817.2019.02.013

• 论著 • 上一篇    下一篇

基于Sequenom MassARRAY SNP技术检测嗅觉受体基因与工作犬嗅探能力的关联性研究

高一龙, 贺星亮, 强京宁, 宋珍华, 温海, 陶晓冉, 孙勇, 秦海斌, 包喜军, 孟戈, 朱骞   

  1. 公安部南京警犬研究所, 警犬技术公安部重点实验室, 南京 210012
  • 收稿日期:2018-11-16 出版日期:2019-04-25 发布日期:2021-01-29
  • 作者简介:高一龙(1982-),男,硕士,副研究员,研究方向:主要从事警犬遗传育种、繁殖和行为遗传学研究。E-mail:gaoyilong726@163.com
  • 基金资助:
    [基金项目]“十三五”国家重点研发计划项目“警犬实战与训练、行为分析及综合评估技术研究”(2016YFC0800310), 江苏省自然科学基金——面 上项目“工作犬主效嗅觉受体基因的筛选及其 与嗅探能力的关联性研究”(BK20141092)

SNP Genotypes of Olfactory Receptor Genes Associated with Sniffing Ability in Working-dogs Based on Sequenom MassARRAY SNP System

GAO Yi-long, HE Xing-liang, QIANG Jing-ning, SONG Zhen-hua, WEN Hai, TAO Xiao-ran, SUN Yong, QIN Hai-bin, BAO Xi-jun, MENG Ge, ZHU Qian   

  1. Nanjing Policedog Institute of the Ministry of Public Security,Policedog Technology Key Laboratory of MPS, Nanjing 210012, China
  • Received:2018-11-16 Online:2019-04-25 Published:2021-01-29

摘要: 目的 开展嗅觉受体基因(OR)的单核苷酸多态性(SNP)与工作犬嗅探能力之间的关联性研究。方法 应用Sequenom MassARRAY SNP技术,对OR基因的单核苷酸多态性(SNP)位点进行检测,并分析不同SNP基因型与工作犬嗅探能力之间的关联性。结果 建立的Sequenom MassARRAY SNP检测OR基因分型技术方法,68个SNP位点在史宾格犬、拉布拉多犬和德国牧羊犬3个犬种中检出率在90%以上; 显示与工作犬的嗅探能力呈一般统计学意义上显著相关(P<0.05)的SNP位点有23个,但经过多重检验bonferroni (BONF)法和FDR_BH法校正后,表明COR52AC1_436、rs850523383、CfOR0149_364和CfOR0055_265这4个SNP位点与嗅探能力分别呈显著相关(P<0.05)和极显著相关(P<0.01)。结论 筛选出显著影响工作犬嗅探能力的主效OR 基因SNP位点4个,初步建立了一种适用于史宾格犬、拉布拉多犬和德国牧羊犬这3个工作犬种,鉴定其嗅探能力的分子遗传学检测方法。

关键词: Sequenom MassARRAY, 嗅觉受体(OR)基因, 单核苷酸多态性(SNP), 工作犬, 嗅探能力

Abstract: Objective To find out the relationship between single nucleotide polymorphism (SNP) genotypes of canine olfactory receptor (OR) genes and odor detection performance in working-dogs. Method The multiplex Sequenom MassARRAY SNP system was adopted to detect the several SNP sites of OR genes and to analyze the correlation between different SNP genotypes and olfactory ability of working-dogs. Results The representative 68 SNP sites from canine OR genome were selected. The detection rate of this system in 3 breeds of Spinger Spaniel, Labrador Retriever and German Shepherd dog were all above 90%. The results showed that 23 SNP sites were found to be significantly correlated with the sniffing ability of working dogs (P< 0.05). But after the Bonferroni correction and FDR_BH correction, only 4 SNP sites including COR52AC1_436, rs850523383, CfOR0149_364 and CfOR0055_265 were found to be significantly correlated with sniffing ability (P< 0.05, BONF) and extremely significant (P< 0.01, FDR_BH). Conclusion Four major SNP sites of OR gene were screened, which significantly affected the sniffing ability of working dogs. A molecular genetic detection method was preliminary established to identify working-dogs potential sniffing ability, which was appropriate for Spinger Spaniel, Labrador Retriever and German Shepherd dog.

Key words: Sequenom MassARRAY, Olfactory receptor (OR) gene, Single nucleotide polymorphism (SNP), Working-dog, Sniffing ability

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